CDS

Accession Number TCMCG073C02627
gbkey CDS
Protein Id XP_010548467.1
Location join(8582349..8582391,8583332..8583447,8583701..8583796,8583905..8583961,8584067..8584219,8584305..8584389,8584473..8584563,8584652..8584816,8584945..8585064,8585175..8585250,8585405..8585546,8585642..8586096,8586210..8586400,8586495..8586669)
Gene LOC104819853
GeneID 104819853
Organism Tarenaya hassleriana

Protein

Length 654aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA268022
db_source XM_010550165.2
Definition PREDICTED: auxin response factor 1 [Tarenaya hassleriana]

EGGNOG-MAPPER Annotation

COG_category K
Description Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs)
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
KEGG_ko ko:K14486        [VIEW IN KEGG]
EC -
KEGG_Pathway ko04075        [VIEW IN KEGG]
map04075        [VIEW IN KEGG]
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003677        [VIEW IN EMBL-EBI]
GO:0003700        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0006355        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0007568        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0009719        [VIEW IN EMBL-EBI]
GO:0009725        [VIEW IN EMBL-EBI]
GO:0009733        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009890        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0010033        [VIEW IN EMBL-EBI]
GO:0010150        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010558        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0010629        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031324        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031327        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0042802        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045892        [VIEW IN EMBL-EBI]
GO:0045934        [VIEW IN EMBL-EBI]
GO:0048366        [VIEW IN EMBL-EBI]
GO:0048367        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048827        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051172        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0051253        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0090693        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0099402        [VIEW IN EMBL-EBI]
GO:0140110        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1902679        [VIEW IN EMBL-EBI]
GO:1903506        [VIEW IN EMBL-EBI]
GO:1903507        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2000113        [VIEW IN EMBL-EBI]
GO:2001141        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCAACAGCTAGTAATAATCCATCTGGAAGACCATGTGGAGGGAAATCAAATGATGCTTTATATAGGGAGTTATGGAATGCCTGTGCTGGACCTCTTGTAACCTTACCTTGTGAAGGCGAGCGTGTTTACTACTTCCCAGAAGGTCATATGGAGCAGCTCGAGGCATCGATGCACCAGGGCTTGGAGCAGCAAATGCCTTCGTTCAATCTTCCGTCTAAGATTCTCTGTAAAGTCATCAATGTTCAGCTTAGGGCTGAACCTGAAACTGATGAAGTTTATGCTCAAATAACCTTGTTCCCAGAAGAAGATCAAAGTGAAGTTACAAGCCTAGATGCCGCAGTCCCGGAACCAGAAAAGTACACAGTACATTCATTTTGCAAGACACTGACTGCTTCAGATACAAGCACACATGGTGGATTCTCTGTTTTACGAAGGCATGCTGATGATTGTCTTCCTCCATTGGATATGTCCCAACAACCACCATGGCAGGAACTGGTTGCAACTGATTTGCATGGAAATGAATGGCATTTTAGGCACATTTTCCGCGGCCAACCGAGGCGGCATTTACTTACTACTGGGTGGAGTGTATTTGTGAGCTCAAAAAAACTAGTGGCTGGTGATGCTTTCATATTCTTAAGGGGTGAGAATGGGGAGCTCCGGGTCGGTGTTAGGAGGCACATGAGACAACTGACCAATATGCCATCCTCTGTTATCTCAAGTCATAGCATGCATCTTGGGGTGCTTGCTACTGCTTCTCATGCCATGACCACCGGAACTATCTTCTCTGTCTTCTACAAGCCAAGGACAAGTAGGTCAGAGTTCATTGTGAGTGTCAATAGGTATCTTGAAGCTAAGAACCACAAGTTGTCTGTGGGGATGCGTTTCAAGATGAGATTTGAGGGCGAGGAAGCTCCTGAAAGAAGGTTCAGTGGCACAATTGTTGGTGTGAAGGAAAATAAATCCACCGTATGGTCTGATTCAGAATGGAGATCGCTAAAGGTTCAATGGGACGAAACTGCATGTGTATTGAGGCCGGAAAGAGTTTCGGCTTGGGAAATTGAGCCCTTAGTTGCGGTAAATACGAATCCTTCCACGAATTCTCAGCCACCACAAAGGAACAAACGGTCAAGACCTCCTCCTGGCATGTGGAAATCCTCTGCAGAAACTCAATCTTCGAGGCCGTTTTTTTCTCCTCCTTCCAAGACTTCTCCTTTTGTCTTTGGTGGCAACATATCACATGGTGTGGTATCAAGTGGCTCAGCCTTTTGGCCCAACCGGGTAGATAGTGCAGTTGAATCTGAAGCTTCAGCCTTTAACAAAGAATCCACCGTGAAAAAGAAACAGGCTACTGGAAATGTCTGCCGGCTTTTTGGAATAGAGTTATTCGAGAATGGTAATGCGGAAGAGTGTTTCTCCACGGCGTCTGTGTCAGGAGCAGCTCTGGTCGATCAACCTGTCCTGTCTAATGAGTTTGACTCTGACCAGCCATTGGATGTCAACCGATCCGATCTTCCTTCTTCGGGAAGTGATCATGAGAAATCCTCACAGAGATCTCCTCAGGAGCTGCAAAGCAGGCAGATACGTAGCTGCACGAAGGTGCACATGCAAGGCAGTGCAGTAGGGAGAGCGGTTGATTTGACGAGATTGGAGTGTTACAAAGATCTGTTCAAGAAGCTGGAAGAGATGTTTGACATTGAAGGTGAACTCTTAGAGTCCACGAAAAGGTGGCAGGTTGTATACACTGATGATGAGGATGACATGATGATGGTCGGTGATGATCCATGGCATGAATTCTGCGGAATGGTGAGAAAGATATTCATCTATACAACGGAGGAAGTGAAGAAACTATCAGCAAAGATAAAGTTTGCTGAAAGGGGGGAAGCAGTGCTGCCGTCAAAAGCATGTGGGGAGGAGGAGACAGGGAACATGGAGGACAGGTCGTCATCGGTAGTTGGATCGTAG
Protein:  
MATASNNPSGRPCGGKSNDALYRELWNACAGPLVTLPCEGERVYYFPEGHMEQLEASMHQGLEQQMPSFNLPSKILCKVINVQLRAEPETDEVYAQITLFPEEDQSEVTSLDAAVPEPEKYTVHSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHGNEWHFRHIFRGQPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENGELRVGVRRHMRQLTNMPSSVISSHSMHLGVLATASHAMTTGTIFSVFYKPRTSRSEFIVSVNRYLEAKNHKLSVGMRFKMRFEGEEAPERRFSGTIVGVKENKSTVWSDSEWRSLKVQWDETACVLRPERVSAWEIEPLVAVNTNPSTNSQPPQRNKRSRPPPGMWKSSAETQSSRPFFSPPSKTSPFVFGGNISHGVVSSGSAFWPNRVDSAVESEASAFNKESTVKKKQATGNVCRLFGIELFENGNAEECFSTASVSGAALVDQPVLSNEFDSDQPLDVNRSDLPSSGSDHEKSSQRSPQELQSRQIRSCTKVHMQGSAVGRAVDLTRLECYKDLFKKLEEMFDIEGELLESTKRWQVVYTDDEDDMMMVGDDPWHEFCGMVRKIFIYTTEEVKKLSAKIKFAERGEAVLPSKACGEEETGNMEDRSSSVVGS